BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D12LP1|AL426523
(326 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig215 312 2e-85
>3x_Contig215
Length = 1068
Score = 312 bits (156), Expect = 2e-85
Identities = 157/158 (99%)
Strand = Plus / Minus
Query: 168 tatatatattbcctacaaatacaactcatttaaccgaaaggttgaaaaataatttatctg 227
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tatatatattccctacaaatacaactcatttaaccgaaaggttgaaaaataatttatctg 131
Query: 228 taaatacatctttccccgcggactcctcccctttaaagggattaccggggggaggagccg 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 taaatacatctttccccgcggactcctcccctttaaagggattaccggggggaggagccg 71
Query: 288 cggggtttcttattaatatttaataataatctccccgg 325
||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cggggtttcttattaatatttaataataatctccccgg 33
Score = 124 bits (62), Expect = 1e-28
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 55 atatatattattcttattatatattaatactaatatgaagggttsatttcccactaccca 114
|||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 299 atatatattattttttttatatattaatactaatatgaagggttcatttcccactaccca 240
Query: 115 atattatatgta 126
||||||||||||
Sbjct: 239 atattatatgta 228
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2982
Number of Sequences: 1807
Number of extensions: 2982
Number of successful extensions: 164
Number of sequences better than 1.0e-20: 1
length of query: 326
length of database: 10,358,551
effective HSP length: 15
effective length of query: 311
effective length of database: 10,331,446
effective search space: 3213079706
effective search space used: 3213079706
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.6 bits)